partek® genomics suite tm software (Partek)

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Partek partek® genomics suite tm software
Partek® Genomics Suite Tm Software, supplied by Partek, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/partek%C2%AE+genomics+suite+tm+software/partek+genomics+suite/pmc07931235__FEB4___11___724___s001-121-7-8
Average 90 stars, based on 1 article reviews

partek® genomics suite tm software - by Bioz Stars, 2026-09

90/100 stars

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Microarray:

Article Title: Stathmin levels alter PTPN14 expression and impact neuroblastoma cell migration
Article Snippet: .. Analysis and visualisation of microarray data for genes and miRNAs were conducted using Partek® Genomics Suite TM software (Partek Inc., MO, USA). ..

Software:

Article Title: Aspartate Metabolism Pathway is Differentiable in Human Hepatocellular Carcinoma: Transcriptomics and 13 C-Isotope based Metabolomics
Article Snippet: Data were acquired with GeneChip® Scanner 3000 7G (Affymetrix, Inc., Santa Clara, CA, USA). .. Statistical Analysis of the Gene Expression Data The CEL files, containing probe-level data from all arrays, were imported into Partek® Genomics Suite TM software (Partek Incorporated, St. Louis, MO) where Robust Multichip Analysis (RMA) normalization was applied yielding log 2 -transformed expression intensities. .. One-way ANOVA was performed on the genes across the 3 groups (i.e. hepatocellular carcinoma, cirrhosis, and non-tumor liver) to provide p-values, and false positive rates (step-up p-values) were computed using the Benjamini-Hochberg step-up algorithm as implemented in Partek.

Article Title: Uptake of circulating extracellular vesicles from rectal cancer patients and differential responses by human monocyte cultures
Article Snippet: Signal intensities were detected by the Hewlett Packard (Palo Alto, CA, USA) 30007G gene array scanner and processed using the Affymetrix GeneChip Command Console software. .. The extracted data were imported into the Partek® genomics suite TM software (Partek Inc., Saint Louis, MO, USA), and the Robust Multichip Analysis algorithm was applied for generation of relative signal values and normalization. .. For technical validation, selected differentially expressed genes were analyzed with qRT–PCR (TaqMan gene expression assays and the Applied Biosystems ViiA7 sequence detection system) in all patients ( n = 22).

Article Title: Aspartate Metabolism Pathway is Differentiable in Human Hepatocellular Carcinoma: Transcriptomics and 13 C-Isotope based Metabolomics
Article Snippet: Data were acquired with GeneChip® Scanner 3000 7G (Affymetrix, Inc., Santa Clara, CA, USA). .. The CEL files, containing probe-level data from all arrays, were imported into Partek® Genomics Suite TM software (Partek Incorporated, St. Louis, MO) where Robust Multichip Analysis (RMA) normalization was applied yielding log 2 -transformed expression intensities. .. One-way ANOVA was performed on the genes across the 3 groups (i.e. hepatocellular carcinoma, cirrhosis, and non-tumor liver) to provide p-values, and false positive rates (step-up p-values) were computed using the Benjamini-Hochberg step-up algorithm as implemented in Partek.

Gene Expression:

Transformation Assay:

Article Title: Aspartate Metabolism Pathway is Differentiable in Human Hepatocellular Carcinoma: Transcriptomics and 13 C-Isotope based Metabolomics
Article Snippet: Data were acquired with GeneChip® Scanner 3000 7G (Affymetrix, Inc., Santa Clara, CA, USA). .. The CEL files, containing probe-level data from all arrays, were imported into Partek® Genomics Suite TM software (Partek Incorporated, St. Louis, MO) where Robust Multichip Analysis (RMA) normalization was applied yielding log 2 -transformed expression intensities. .. One-way ANOVA was performed on the genes across the 3 groups (i.e. hepatocellular carcinoma, cirrhosis, and non-tumor liver) to provide p-values, and false positive rates (step-up p-values) were computed using the Benjamini-Hochberg step-up algorithm as implemented in Partek.

Expressing:

Article Title: Aspartate Metabolism Pathway is Differentiable in Human Hepatocellular Carcinoma: Transcriptomics and 13 C-Isotope based Metabolomics
Article Snippet: Data were acquired with GeneChip® Scanner 3000 7G (Affymetrix, Inc., Santa Clara, CA, USA). .. The CEL files, containing probe-level data from all arrays, were imported into Partek® Genomics Suite TM software (Partek Incorporated, St. Louis, MO) where Robust Multichip Analysis (RMA) normalization was applied yielding log 2 -transformed expression intensities. .. One-way ANOVA was performed on the genes across the 3 groups (i.e. hepatocellular carcinoma, cirrhosis, and non-tumor liver) to provide p-values, and false positive rates (step-up p-values) were computed using the Benjamini-Hochberg step-up algorithm as implemented in Partek.

other:

Article Title: Uptake of circulating extracellular vesicles from rectal cancer patients and differential responses by human monocyte cultures
Article Snippet: The extracted data were imported into the 315 Partek® Genomics Suite TM software (Partek Inc., Saint Louis) and the Robust Multichip 316 Analysis algorithm was applied for generation of relative signal values and normalization.

Article Title: Two splicing factors carrying serine-arginine motifs, TSR1 and TSR1IP, regulate splicing, mRNA stability, and rRNA processing in Trypanosoma brucei
Article Snippet: 80 The subsequent analysis was performed using Partek® Genomics Suite TM software, version 6.6 (© 2012 Partek Inc.).

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